autofragment.core

Core data structures and utilities for autofragment.

Modules

atom

Memory-efficient atom storage utilities.

bonds

Bond detection and interfragment bond representation.

chemistry

Chemistry utilities and periodic table data.

geometry

Geometric utilities for isolated molecular fragments.

graph

Graph-based molecular representation using networkx.

lattice

Lattice vector representation and operations.

periodic

Periodic boundary condition utilities.

types

Core data types for autofragment.