autofragment.partitioners.batch

Batch partitioner for consistent labeling across multiple files.

This module provides the BatchPartitioner class for partitioning multiple molecular systems with consistent fragment labeling, using a reference structure for alignment and matching.

Classes

AssignmentQuality(mean_centroid_distance, ...)	Quality metrics for molecule-to-reference assignment.
BatchPartitioner(reference_tree, ...[, ...])	Partitioner for multiple files with consistent labeling.

Exceptions

BatchPartitionError

Raised when batch partitioning fails.