autofragment.rules.matsci
Materials science fragmentation rules.
This module provides rules for solid-state and extended materials systems, including silica, zeolites, metal-organic frameworks (MOFs), and perovskites.
These rules handle the unique bonding patterns found in materials science applications where periodic structures and inorganic bonding dominate.
Classes
|
Preserve organic linker molecules in MOFs. |
|
Allow breaking of Metal-Oxygen bonds in carboxylate linkers. |
|
Preserve metal node coordination in materials. |
|
Preserve MO₆ octahedra in perovskites. |
|
Manage polymer backbone fragmentation. |
|
Preserve terminal silanol (Si-OH) groups. |
|
Handle Si-O-Si siloxane bridge bonds. |
|
Preserve Brønsted acid sites (Al-O-H-Si) in zeolites. |